Phylogenetics
| Created: | 2007-11-28 14:48 |
|---|---|
| Institution: | Isaac Newton Institute for Mathematical Sciences |
| Description: | Phylogenetics is the reconstruction and analysis of trees and networks to describe and understand the evolution of species, populations and individuals. It is widely used in molecular biology and other areas of classification (such as linguistics), and has both led to and benefited from the development of new mathematical, statistical and computational techniques. Although the foundations of phylogenetics were laid down many decades ago, it is currently experiencing an exciting renaissance due to the wealth and types of biological data that are now becoming available. This programme will bring together key researchers in phylogenetics and related areas to further develop this important area of mathematical biology.
The main themes that will be worked on during this programme are new data types in phylogenetics; modelling reticulate evolution; constructing large trees; probabilistic models of evolution; and phylogenetic combinatorics. These themes provide a rich source of mathematical problems in areas such as combinatorics, graph theory, probability theory, topology, and algebraic geometry. Solutions to these problems will provide new insights to questions that are central to contemporary evolutionary biology. EVENTS: - Spitalfields Day - Yggdrasil: Reconstructing the Tree of Life http://www.newton.ac.uk/programmes/PLG/PLG_Spitalfields.html - Current Challenges and Problems in Phylogenetics http://www.newton.ac.uk/programmes/PLG/plgw01.html - Future Directions in Phylogenetic Methods and Models http://www.newton.ac.uk/programmes/PLG/plgw03.html - Phylogenetics: New data, new Phylogenetic challenges http://www.newton.ac.uk/programmes/PLG/plgw05.html |
Media items
This collection contains 126 media items.
Media items
10 Men and 1 woman?
von Haeseler, A (MFPL, Vienna)
Wednesday 19 December 2007, 11:10-11:30
Future Directions in Phylogenetic Methods and Models
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Mon 14 Jan 2008
A genealogical approach to studying asexuality
Song, Y (California)
Friday 21 December 2007, 10:40-11:00
PLGw03 - Future Directions in Phylogenetic Methods and Models
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Wed 16 Jan 2008
A generalization of Stirling numbers and distribution of phylogenetic trees
Czabarka, E (South Carolina)
Thursday 23 June 2011, 11:50-12:10
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Mon 27 Jun 2011
A Lie algebraic classification of continuous-time Markov models
Sumner, J (Tasmania)
Thursday 23 June 2011, 11:30-11:50
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Mon 27 Jun 2011
A phylogenetic definition of structure and further animations on the sequence space
Gesell, T (MFPL, Vienna )
Thursday 20 December 2007, 10:00-10:20
PLGw03 - Future Directions in Phylogenetic Methods and Models
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Mon 14 Jan 2008
A signal-to-noise analysis of phylogeny estimation by neighbour-joining
Lacey, M (Tulane)
Monday 17 December 2007, 15:30-15:50
PLGw03 - Future Directions in Phylogenetic Methods and Models
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Thu 10 Jan 2008
A simple model for a complex world
Whelan, S (Manchester)
Thursday 20 December 2007, 11:50-12:10
PLGw03 - Future Directions in Phylogenetic Methods and Models
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Tue 15 Jan 2008
Adaptive fast convergence - towards optimal reconstruction guarantees for Phylogenetic trees
Gronau, I (Technion)
Monday 17 December 2007, 14:20-14:40
PLGw03 - Future Directions in Phylogenetic Methods and Models
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Thu 10 Jan 2008
Advances and limitations of maximum likelihood phylogenetics
Gascuel, O (Montpellier)
Tuesday 04 September 2007, 09:00-10:00
PLGw01 - Current Challenges and Problems in Phylogenetics
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Tue 11 Sep 2007
Algorithm design for large-scale phylogenetic analysis
Warnow, T (Texas)
Thursday 06 December 2007, 14:00-15:00
Spitalfields Day - Yggdrasil: Reconstructing the Tree of Life
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Thu 13 Dec 2007
An empirical study of the effect of sequence alignment on phylogenetic analysis
Blackburne, B (Manchester)
Wednesday 22 June 2011, 15:00-15:20
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Mon 27 Jun 2011
An exact algorithm for computing the geodesic distance between phylogenetic trees
Kupczok, A (CIBIV)
Tuesday 18 December 2007, 10:00-10:20
PLGw03 - Future Directions in Phylogenetic Methods and Models
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Fri 11 Jan 2008
Appropriate models for heterogeneous multi-gene data sites
Holland, B (Massey)
Monday 03 September 2007, 11:50-12:10
PLGw01 - Current Challenges and Problems in Phylogenetics
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Fri 7 Sep 2007
Are there alternatives to handling site-to-site rate variation in evolutionary characters
McInerney, JO (National University of Ireland)
Wednesday 22 June 2011, 16:00-17:00
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Mon 27 Jun 2011
Assessing the limits of phylogenomics: can too much data be a bad thing?
Bininda-Emonds, O (Carl von Ossietzky Universität Oldenburg)
Friday 24 June 2011, 09:00-10:00
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Mon 27 Jun 2011
Big trees: challenges and opportunites in the phylogenetic analysis of large data sets
Rodrigo, AG (Auckland)
Thursday 06 September 2007, 14:00-15:00
PLGw01 - Current Challenges and Problems in Phylogenetics
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Mon 24 Sep 2007
Branch and bound construction of balanced minimum evolution optimal trees
Pardi, F (EMBL)
Tuesday 04 September 2007, 15:30-15:50
PLGw01 - Current Challenges and Problems in Phylogenetics
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Thu 13 Sep 2007
Coalescent consequences for consensus cladograms
Degnan, J (Michigan)
Friday 21 December 2007, 10:00-10:20
PLGw03 - Future Directions in Phylogenetic Methods and Models
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Tue 15 Jan 2008
Coalescent-based Species Tree Inference from Gene Tree Topologies Under Incomplete Lineage Sorting by Maximum Likelihood
Wu, Y (Connecticut)
Thursday 23 June 2011, 10:20-10:40
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Mon 27 Jun 2011
Comparing phylogenetic trees
St John, K (New York)
Monday 03 September 2007, 15:50-16:10
PLGw01 - Current Challenges and Problems in Phylogenetics
Collection: Phylogenetics
Institution: Isaac Newton Institute for Mathematical Sciences
Created: Thu 6 Sep 2007